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BioBam Bioinformatics

BioBam Bioinformatics is a Valencia-based bioinformatics software company developing tools for the analysis, annotation, and interpretation of biological and genomics data.

Last updated August 31, 2026

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Overview

BioBam Bioinformatics is a bioinformatics software company headquartered in Valencia, Spain. Founded in 2011 by Dr. Stefan Götz and Dr. Ana Conesa, the company develops software for analyzing biological data, with a particular emphasis on the functional annotation and interpretation of genomics datasets. Its tools are used by public and private research organizations internationally. The company is best known for Blast2GO, a platform designed to support functional genomics workflows, especially research involving non-model organisms. Blast2GO assists researchers in assigning functional information to novel sequences and in examining annotation data across whole genomes or other large datasets. This places BioBam within the research-software segment of the life-sciences technology industry, where computational tools help convert sequencing results into biologically meaningful classifications and hypotheses. Blast2GO has been associated with a widely cited scientific publication describing the software and its use in functional annotation. The product's adoption reflects the practical need for accessible bioinformatics workflows that can be applied when genomic resources are incomplete or when researchers are working outside heavily studied model species. Rather than positioning itself as a general consumer technology brand, BioBam serves specialist users including academic laboratories, research institutes, and private-sector life-sciences organizations. BioBam has also developed relationships with other bioinformatics software companies, including CLC bio and Biomatters. These partnerships indicate an ecosystem-oriented approach in which BioBam's annotation and analysis capabilities can complement broader sequence-analysis and genomics platforms. The company is led by Dr. Stefan Götz, who is identified as its managing director and was also one of its founders. Publicly available reference material provides limited information about later corporate ownership, financial performance, employee numbers, or a broader portfolio beyond the company's bioinformatics software activities.

History

BioBam Bioinformatics was established in 2011 in Valencia, Spain, by Dr. Stefan Götz and Dr. Ana Conesa. The company was created to commercialize and develop software supporting the interpretation of biological and genomics data. Its work addresses a recurring challenge in modern life-sciences research: sequencing projects can generate large volumes of raw data, but researchers need computational methods to assign functions to sequences and identify biological patterns within the resulting datasets. BioBam's central product became Blast2GO, a functional genomics platform aimed particularly at studies of non-model organisms. In such research areas, investigators may have fewer reference genomes, annotations, or established analytical resources than are available for extensively studied species. Blast2GO supports the annotation of novel sequences and the broader analysis of annotation results across genomic datasets, allowing researchers to organize sequence information and relate it to biological functions. The software gained visibility through the scientific literature describing its methodology and applications. The associated publication became highly cited, helping establish Blast2GO as a recognized tool within functional genomics and bioinformatics research. Its use by public and private research organizations in different countries gave BioBam an international customer and user base despite the company's Spanish headquarters. BioBam also formed partnerships with other bioinformatics companies, including CLC bio and Biomatters. These relationships placed its products within a wider software ecosystem for sequence analysis, genomics, and biological research. The partnerships suggest that BioBam's tools were intended to work alongside complementary platforms rather than operate only as an isolated application. Dr. Stefan Götz has been identified as BioBam's managing director and is one of the company's original founders. Dr. Ana Conesa is also identified as a founder. Available reference material does not provide enough information to document subsequent ownership changes, major acquisitions, public-market activity, financial results, or a detailed chronology of product revisions. The company is described as an active provider of bioinformatics software, with its public identity centered on genomics annotation and analysis.

  • 2016

    Blast2GO publication reaches thousands of citations

    [1]

    The scientific paper describing Blast2GO was reported as having received more than 3,528 citations by January 2016, illustrating the product's visibility in the research community.

  • 2011

    BioBam is founded

    [1]

    Dr. Stefan Götz and Dr. Ana Conesa founded BioBam Bioinformatics in Valencia, Spain, to develop and provide software for biological-data analysis.

  • Blast2GO becomes the company's best-known product

    [1]

    Blast2GO established BioBam's principal product identity through software for functional annotation and analysis of genomics data, with particular relevance to non-model-organism research.

Products and positioning

A specialist bioinformatics software provider focused on functional annotation and analysis of genomics data, particularly for research involving novel sequences and non-model organisms.

  • Functional genomics and sequence annotation software

    Blast2GO

    Blast2GO is BioBam's best-known bioinformatics product. It supports the functional annotation of novel biological sequences and the analysis of annotation data across genome-scale datasets. The platform is especially associated with functional genomics research involving non-model organisms, where researchers may lack the extensive reference resources available for major model species. Its workflow helps connect sequence information with functional classifications and enables researchers to examine the distribution and significance of annotations in larger biological datasets.

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